proteincakery.com

  • High Protein Fall Recipes
  • Recipes
  • About
  • Subscribe
menu icon
go to homepage
  • High Protein Fall Recipes
  • Recipes
  • About
  • Subscribe
subscribe
search icon
Homepage link
  • High Protein Fall Recipes
  • Recipes
  • About
  • Subscribe
×
Home > Recipes > Protein Cookie Recipes

Protein Pumpkin Cookies (Easy, Healthy, Low Calorie)

smiling woman in kitchen.
Updated on Dec 13, 2025 · By Andréa Marchese · This post may contain affiliate links · 2 Comments

Jump to Recipe
4 protein pumpkin cookies with text overlay.
4 protein pumpkin cookies and one bitten cookie with text overlay.
4 protein pumpkin cookies with text overlay.

These protein pumpkin cookies are a must-have treat for pumpkin season. With 7 grams of protein per cookie, these healthy pumpkin cookies are a satisfying snack that can double as a quick protein breakfast! 

three stacked pumpkin protein cookies with a fourth cookie angled on the side of the stack, all on a white plate with a light background

Ingredients for High Protein Pumpkin Cookies

To make these macro friendly pumpkin cookies, you'll need:

  • ⅓ cup natural vanilla whey protein 31g
  • 1 tablespoon coconut flour 7g
  • ¼ cup canned pumpkin 62g
  • 2 teaspoons coconut sugar 8g
  • ⅛ teaspoon pumpkin pie spice
  • ¼ teaspoon baking powder
  • 1 pinch sea salt (or regular salt)
  • 1 tablespoon chopped pecans
ingredients for protein pumpkin cookies in their packages on a kitchen counter.

Ingredient Notes and Substitutions

Whey Protein: If you'd like to use a whey/casein blend instead (like Quest or PEScience protein), reduce the coconut flour to 1 teaspoon.  I do not recommend using plant-based protein powder in this recipe. I have a different recipe for vegan protein pumpkin cookies.

Coconut Flour: I do not recommend substituting the coconut flour with almond flour or other flours. Each flour works differently in baking, and the texture and flavor would be very different with other flours.

Coconut Sugar: I like coconut sugar because it is unprocessed and low glycemic. But other granulated sweeteners can be substituted for the coconut sugar here.

Chopped Pecans: Feel free to swap the pecans with other nuts or even white or dark chocolate chips for a different flavor profile.

Recipe Variations

These low calorie protein cookies would be great with other whey protein flavors! Swap the vanilla protein powder for chocolate whey, a snickerdoodle or cinnamon whey, or coffee flavored whey protein powder, for example.

I use this strawberry whey protein in a similar recipe for strawberry whey protein cookies.

Pumpkin Sandwich Cookies: Sandwich two cookies together with almond butter or protein frosting!

bitten pumpkin protein cake-like cookie on a white plate and a couple more cookies off to the side
Pumpkin Protein Cookies

How to Make Pumpkin Protein Cookies

  1. Preheat your oven to 325°F (163°C) and line a baking sheet with parchment paper for easy cleanup.
  2. In a large bowl, combine the dry ingredients: whey protein, coconut flour, coconut sugar, pumpkin pie spice, baking powder, and salt. Mix well.
  3. Add the pumpkin puree to the dry ingredients and mix until a cookie batter forms.
  4. Fold in the chopped pecans.
  5. Spoon the cookie batter onto the prepared baking sheet as 4 cookies, leaving enough space between each cookie.
  6. Bake for 5 minutes, and check to see if they are firm. If not, check every minute. Be sure not to over-bake these cookies! For best results, take them out as soon as they are firm.
  7. Let cool, and enjoy!

FAQ

Can I use a plant-based protein powder instead of whey?

In this recipe, I wouldn't recommend plant-based protein powder. I have a different recipe for vegan pumpkin protein cookies.

Can I use regular sugar instead of coconut sugar?

While coconut sugar provides a natural low glycemic sweetness, you can use regular sugar if that's what you have on hand.

Can I use pumpkin pie filling instead of puree?

Yes, you can use pumpkin pie filling in place of the pumpkin puree here. In this case, you'll want to lessen or omit the sweetener and spices called for in the recipe.

Can I use a different type of protein powder?

If you'd like to use a whey/casein blend instead (like Quest or PEScience protein), reduce the coconut flour to 1 teaspoon.  I do not recommend using plant-based protein powder in this recipe. I have a different recipe for vegan pumpkin protein cookies.

Can I use regular flour instead of coconut flour?

I do not recommend substituting the coconut flour with all purpose flour or other flours. Each flour works differently in baking, and the texture, flavor, and nutritional profile would be very different with other flours.

How many calories are in each pumpkin protein cookie?

These low calorie pumpkin cookies each have 63 calories with 6 g carbs (1 g fiber), 7 g protein, and 2 g fat.

Give this healthy pumpkin treat a try and let us know how it goes in the comments!

Recipe

three stacked pumpkin protein cookies with a fourth cookie angled on the side of the stack, all on a white plate with a light background

Pumpkin Protein Cookies

Andréa Marchese
These quick and easy protein pumpkin cookies are great for fall meal prep (snack prep) and protein breakfasts on the go. Give this healthy pumpkin cookie recipe a try!
4.80 from 5 votes
Print Recipe Pin Recipe
Prep Time 5 minutes mins
Cook Time 6 minutes mins
Total Time 11 minutes mins
Servings 4 cookies

Equipment

  • cookie sheet
  • parchment paper
  • mixing bowl
  • oven thermometer
  • kitchen scale

Ingredients

  • ⅓ cup natural vanilla whey protein 31g
  • 1 tablespoon coconut flour 7g
  • ¼ cup pumpkin puree 62g
  • 2 teaspoons coconut sugar 8g
  • ⅛ teaspoon pumpkin pie spice
  • ¼ teaspoon baking powder
  • 1 pinch sea salt (or regular salt)
  • 1 tablespoon chopped pecans

Instructions
 

  • Preheat oven to 325F (163C).
  • Except for the pecans, mix all cookie ingredients until well combined.
  • Fold in the pecans.
  • Spoon batter onto a parchment-lined cookie sheet as 4 cookies. Use the back of your spoon to help shape them.
  • Bake for 5 minutes, and check to see if they are firm. If not, continue to bake and check every 1-2 minutes. For best results, remove from oven as soon as they are firm. (Over-baked whey cookies can get very dry.)
  • Enjoy! Store in the refrigerator.

Notes

SUBSTITUTIONS:
Whey Protein: If you'd like to use a whey/casein blend instead (like Quest or PEScience), reduce the coconut flour to 1 teaspoon.  I do not recommend using plant-based protein powder in this recipe. I have a different recipe for vegan pumpkin protein cookies.
Coconut Flour: I do not recommend substituting the coconut flour with almond flour or other flours. Each flour works differently in baking, and the texture and flavor would be very different with other flours.
Coconut Sugar: Other granulated sweeteners can be substituted for the coconut sugar here.
Chopped Pecans: Feel free to swap them with other nuts or even white or dark chocolate chips for a different flavor profile.
 
VARIATIONS:
This whey protein pumpkin cookies recipe would be great with other whey protein flavors! Swap the vanilla protein powder for chocolate whey, snickerdoodle or cinnamon whey, or coffee flavored whey protein powder, for example.
I use this strawberry whey protein in a similar recipe for strawberry whey protein cookies.
Pumpkin Sandwich Cookies: Sandwich two pumpkin spice protein cookies together with almond butter or protein frosting in between!
 
STORAGE:
These cookies will stay well in an airtight container in the refrigerator for several days.

Nutrition

Serving: 1cookie | Calories: 63kcal | Carbohydrates: 6g | Protein: 7g | Fat: 2g | Fiber: 1g | Sugar: 3g

If you enjoy this recipe, try these Chocolate Whey Protein Cookies, these Black and White Protein Cookies, these Protein Whoopie Pies, and these Very Strawberry Protein Cookies. Lots of easy delicious whey protein cookies to be made!

🎃 More pumpkin recipes

Don't forget to check out our protein pumpkin pie recipe and these delicious healthy pumpkin recipes:

  • Pumpkin spice overnight protein oats - delicious for breakfast or an anytime snack!
  • Pumpkin spice protein mousse - an avocado-based no-bake dessert
  • Low carb pumpkin protein cheesecake - guilt-free indulgence!

Find easy healthy pumpkin desserts and all of our pumpkin spice protein recipes here: Pumpkin Protein Recipes.

More Protein Cookie Recipes

  • collage of protein cookies with text overlay.
    30+ EASY Protein Cookies Recipes
  • banana protein cookies on parchment on a cooling rack.
    Banana Protein Cookies (3 Ingredients!)
  • two gingerbread whoopie pie cookies on a white plate with a light background
    High Protein Gingerbread Whoopie Pies
  • three full and one half chocolate pumpkin vegan cookies with chocolate chips on a white plate on a grey wood surface
    Pumpkin Chocolate Chip Protein Cookies

Comments

  1. Andréa says

    February 04, 2015 at 4:23 pm

    So glad to hear you like them!
    Thanks for writing in! :)

  2. Alexis says

    February 01, 2015 at 6:10 pm

    I LOVE THESE! I don't like pecans so I made them without, but they are sooo good and so easy! Thank you so much Andrea for this perfect recipe! :)

Leave a Reply

Your email address will not be published. Required fields are marked *

Recipe Rating




smiling woman in kitchen.

Hi, I'm Andréa! I’ve been baking with protein powder since 2013, and I can give you all the top tips for creating delicious high protein snacks, desserts, and more.

More about me →

High Protein Fall Recipes

  • sliced loaf of high protein pumpkin bread on a cutting board surrounded by decorative mini pumpkins.
    Protein Pumpkin Bread (Easy, Healthy)
  • three stacked pumpkin protein cookies with a fourth cookie angled on the side of the stack, all on a white plate with a light background
    Protein Pumpkin Cookies (Easy, Healthy, Low Calorie)
  • pecan protein squares, each topped with a pecan half.
    Pecan Protein Bites
  • three slices of high protein pumpkin pie in the pie dish, with sugar free whipped cream on top.
    Protein Pumpkin Pie (Easy, Delicious, Healthy Recipe)
  • yellow and orange layered protein cupcake with white frosting and three pieces of protein candy corn on top
    Healthy Candy Corn Cupcakes (No Food Dyes)
  • piece of pumpkin protein cheesecake topped with sugar free whipped cream, with a forkful of cheesecake.
    Pumpkin Protein Cheesecake (Low Carb Recipe)

Trending Recipes

  • the stacked slices of high protein zucchini bread next to a zucchini.
    Protein Zucchini Bread: A High-Protein, Healthy Treat
  • top view of a pile of protein peanut butter cookies.
    Peanut Butter Protein Cookies (Ultimate Recipe)
  • collagen protein being added to a cup of hot coffee
    The Best Protein Powder For Coffee
  • 4 halves of banana peanut butter protein cookies stacked on a white plate with crumbs in front.
    Banana Peanut Butter Protein Cookies (Easy, Healthy) 
  • a sunlit bitten piece of protein banana bread being pulled off a stack, with a banana in the background.
    Protein Banana Bread
  • chocolate protein balls in a serving dish with one bitten.
    Chocolate Fudge Brownie Protein Balls

Footer

↑ back to top

Contact: andrea@proteincakery.com
Privacy Policy

Copyright © 2026 proteincakery.com

Rate This Recipe

Your vote:




A rating is required
A name is required
An email is required